Carnation DB

Dca16918.1

Annotation

53-exons
f-1
sp|B9GIN6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1069777#GO:0005524;GO:0016301;GO:0016773#3F0P0C
Os05t0235300-01 PIK-related kinase domain containing protein.
Repeat List (scaffold185)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16918.1	1779	2346	2365	19.78	568	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GIN6_POPTR	1872	2479	2483	24.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16918.1	1779	2346	2365	19.61	568	77	0
Target_name	Start	End	Length	Cov(%)
AT1G50030.1	1875	2477	2481	24.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold185	Augustus	mRNA	55344	83756	.	+	.	ID=Dca16918.1;Parent=Dca16918
scaffold185	Augustus	exon	55344	55472	.	+	.	ID=Dca16918.1.exon1;Parent=Dca16918.1
scaffold185	Augustus	exon	56664	57002	.	+	.	ID=Dca16918.1.exon2;Parent=Dca16918.1
scaffold185	Augustus	exon	57303	57377	.	+	.	ID=Dca16918.1.exon3;Parent=Dca16918.1
scaffold185	Augustus	exon	58144	58316	.	+	.	ID=Dca16918.1.exon4;Parent=Dca16918.1
scaffold185	Augustus	exon	59343	59441	.	+	.	ID=Dca16918.1.exon5;Parent=Dca16918.1
scaffold185	Augustus	exon	59898	60057	.	+	.	ID=Dca16918.1.exon6;Parent=Dca16918.1
scaffold185	Augustus	exon	60182	60325	.	+	.	ID=Dca16918.1.exon7;Parent=Dca16918.1
scaffold185	Augustus	exon	60457	60626	.	+	.	ID=Dca16918.1.exon8;Parent=Dca16918.1
scaffold185	Augustus	exon	60738	60939	.	+	.	ID=Dca16918.1.exon9;Parent=Dca16918.1
scaffold185	Augustus	exon	61679	61870	.	+	.	ID=Dca16918.1.exon10;Parent=Dca16918.1
scaffold185	Augustus	exon	62285	62437	.	+	.	ID=Dca16918.1.exon11;Parent=Dca16918.1
scaffold185	Augustus	exon	62536	62657	.	+	.	ID=Dca16918.1.exon12;Parent=Dca16918.1
scaffold185	Augustus	exon	62982	63081	.	+	.	ID=Dca16918.1.exon13;Parent=Dca16918.1
scaffold185	Augustus	exon	63169	63264	.	+	.	ID=Dca16918.1.exon14;Parent=Dca16918.1
scaffold185	Augustus	exon	64646	64776	.	+	.	ID=Dca16918.1.exon15;Parent=Dca16918.1
scaffold185	Augustus	exon	66905	67007	.	+	.	ID=Dca16918.1.exon16;Parent=Dca16918.1
scaffold185	Augustus	exon	67077	67262	.	+	.	ID=Dca16918.1.exon17;Parent=Dca16918.1
scaffold185	Augustus	exon	67399	67491	.	+	.	ID=Dca16918.1.exon18;Parent=Dca16918.1
scaffold185	Augustus	exon	67631	67666	.	+	.	ID=Dca16918.1.exon19;Parent=Dca16918.1
scaffold185	Augustus	exon	68469	68567	.	+	.	ID=Dca16918.1.exon20;Parent=Dca16918.1
scaffold185	Augustus	exon	68645	68743	.	+	.	ID=Dca16918.1.exon21;Parent=Dca16918.1
scaffold185	Augustus	exon	68849	69011	.	+	.	ID=Dca16918.1.exon22;Parent=Dca16918.1
scaffold185	Augustus	exon	69095	69219	.	+	.	ID=Dca16918.1.exon23;Parent=Dca16918.1
scaffold185	Augustus	exon	69306	69358	.	+	.	ID=Dca16918.1.exon24;Parent=Dca16918.1
scaffold185	Augustus	exon	70585	70708	.	+	.	ID=Dca16918.1.exon25;Parent=Dca16918.1
scaffold185	Augustus	exon	70832	71017	.	+	.	ID=Dca16918.1.exon26;Parent=Dca16918.1
scaffold185	Augustus	exon	71304	71456	.	+	.	ID=Dca16918.1.exon27;Parent=Dca16918.1
scaffold185	Augustus	exon	71546	71698	.	+	.	ID=Dca16918.1.exon28;Parent=Dca16918.1
scaffold185	Augustus	exon	72518	72589	.	+	.	ID=Dca16918.1.exon29;Parent=Dca16918.1
scaffold185	Augustus	exon	72719	72853	.	+	.	ID=Dca16918.1.exon30;Parent=Dca16918.1
scaffold185	Augustus	exon	72947	73008	.	+	.	ID=Dca16918.1.exon31;Parent=Dca16918.1
scaffold185	Augustus	exon	73105	73202	.	+	.	ID=Dca16918.1.exon32;Parent=Dca16918.1
scaffold185	Augustus	exon	73887	73996	.	+	.	ID=Dca16918.1.exon33;Parent=Dca16918.1
scaffold185	Augustus	exon	74198	74371	.	+	.	ID=Dca16918.1.exon34;Parent=Dca16918.1
scaffold185	Augustus	exon	75814	75882	.	+	.	ID=Dca16918.1.exon35;Parent=Dca16918.1
scaffold185	Augustus	exon	75957	76067	.	+	.	ID=Dca16918.1.exon36;Parent=Dca16918.1
scaffold185	Augustus	exon	76481	76621	.	+	.	ID=Dca16918.1.exon37;Parent=Dca16918.1
scaffold185	Augustus	exon	77455	77583	.	+	.	ID=Dca16918.1.exon38;Parent=Dca16918.1
scaffold185	Augustus	exon	77675	77837	.	+	.	ID=Dca16918.1.exon39;Parent=Dca16918.1
scaffold185	Augustus	exon	77934	78148	.	+	.	ID=Dca16918.1.exon40;Parent=Dca16918.1
scaffold185	Augustus	exon	79496	79609	.	+	.	ID=Dca16918.1.exon41;Parent=Dca16918.1
scaffold185	Augustus	exon	79685	79888	.	+	.	ID=Dca16918.1.exon42;Parent=Dca16918.1
scaffold185	Augustus	exon	80013	80093	.	+	.	ID=Dca16918.1.exon43;Parent=Dca16918.1
scaffold185	Augustus	exon	80726	80800	.	+	.	ID=Dca16918.1.exon44;Parent=Dca16918.1
scaffold185	Augus-PASA	exon	80893	80959	.	+	.	ID=Dca16918.1.exon45;Parent=Dca16918.1
scaffold185	Augus-PASA	exon	81041	81201	.	+	.	ID=Dca16918.1.exon46;Parent=Dca16918.1
scaffold185	Augustus	exon	81516	81689	.	+	.	ID=Dca16918.1.exon47;Parent=Dca16918.1
scaffold185	Augus-PASA	exon	81774	81902	.	+	.	ID=Dca16918.1.exon48;Parent=Dca16918.1
scaffold185	Augus-PASA	exon	82436	82497	.	+	.	ID=Dca16918.1.exon49;Parent=Dca16918.1
scaffold185	Augus-PASA	exon	82583	82655	.	+	.	ID=Dca16918.1.exon50;Parent=Dca16918.1
scaffold185	Augus-PASA	exon	82776	82910	.	+	.	ID=Dca16918.1.exon51;Parent=Dca16918.1
scaffold185	Augus-PASA	exon	83103	83261	.	+	.	ID=Dca16918.1.exon52;Parent=Dca16918.1
scaffold185	Augustus	exon	83430	83756	.	+	.	ID=Dca16918.1.exon53;Parent=Dca16918.1