Carnation DB

Dca16935.1

Annotation

6-exons
f-1
sp|F6H655_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0091g00880#GO:0043169;GO:0004553;GO:0005975#2F1P0C
Repeat List (scaffold185)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16935.1	17	176	189	34.39	160	32	3e-19
Target_name	Start	End	Length	Cov(%)
sp\|F6H655_VITVI	36	242	595	34.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16935.1	30	151	189	27.51	122	31	7e-16
Target_name	Start	End	Length	Cov(%)
AT4G33860.1	25	193	576	29.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold185	Augus-PASA	mRNA	222868	225519	.	+	.	ID=Dca16935.1;Parent=Dca16935
scaffold185	Augus-PASA	exon	222868	222931	.	+	.	ID=Dca16935.1.exon1;Parent=Dca16935.1
scaffold185	Augus-PASA	exon	223370	223416	.	+	.	ID=Dca16935.1.exon2;Parent=Dca16935.1
scaffold185	Augustus	exon	223580	223655	.	+	.	ID=Dca16935.1.exon3;Parent=Dca16935.1
scaffold185	Augus-PASA	exon	224425	224591	.	+	.	ID=Dca16935.1.exon4;Parent=Dca16935.1
scaffold185	Augus-PASA	exon	224758	224856	.	+	.	ID=Dca16935.1.exon5;Parent=Dca16935.1
scaffold185	Augus-PASA	exon	225403	225519	.	+	.	ID=Dca16935.1.exon6;Parent=Dca16935.1