Carnation DB

Dca16946.1

Annotation

7-exons
f-3
sp|B9HI10_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_873612#GO:0004252;GO:0006508#1F1P0C
Os05t0417100-01 Peptidase S1C, HrtA/DegP2/Q/S family protein.

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16946.1	1	420	425	83.29	420	80	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HI10_POPTR	140	578	587	74.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16946.1	1	417	425	81.88	417	81	0
Target_name	Start	End	Length	Cov(%)
Os05t0417100-01	166	598	615	70.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold18509	Augustus	mRNA	679	3450	.	+	.	ID=Dca16946.1;Parent=Dca16946
scaffold18509	Augustus	exon	679	924	.	+	.	ID=Dca16946.1.exon1;Parent=Dca16946.1
scaffold18509	Augustus	exon	1011	1206	.	+	.	ID=Dca16946.1.exon2;Parent=Dca16946.1
scaffold18509	Augustus	exon	1521	1780	.	+	.	ID=Dca16946.1.exon3;Parent=Dca16946.1
scaffold18509	Augustus	exon	1986	2065	.	+	.	ID=Dca16946.1.exon4;Parent=Dca16946.1
scaffold18509	Augustus	exon	2706	2909	.	+	.	ID=Dca16946.1.exon5;Parent=Dca16946.1
scaffold18509	Augustus	exon	2995	3045	.	+	.	ID=Dca16946.1.exon6;Parent=Dca16946.1
scaffold18509	Augustus	exon	3210	3450	.	+	.	ID=Dca16946.1.exon7;Parent=Dca16946.1