Carnation DB

Dca16984.1

Annotation

5-exons
f-1
sp|F6HYL9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0037g00730#unknown#0F0P0C
Os02t0179800-00 Integrase, N-terminal zinc-binding domain domain containing protein.
Repeat List (scaffold1853)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16984.1	1	1119	1120	63.48	1119	62	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HYL9_VITVI	1	1158	1158	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16984.1	5	1115	1120	58.66	1111	57	0
Target_name	Start	End	Length	Cov(%)
AT4G30790.1	1	1144	1148	99.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1853	Augustus	mRNA	6982	12594	.	+	.	ID=Dca16984.1;Parent=Dca16984
scaffold1853	Augustus	exon	6982	7922	.	+	.	ID=Dca16984.1.exon1;Parent=Dca16984.1
scaffold1853	Augustus	exon	9113	10703	.	+	.	ID=Dca16984.1.exon2;Parent=Dca16984.1
scaffold1853	Augus-PASA	exon	11407	11627	.	+	.	ID=Dca16984.1.exon3;Parent=Dca16984.1
scaffold1853	Augus-PASA	exon	11899	12112	.	+	.	ID=Dca16984.1.exon4;Parent=Dca16984.1
scaffold1853	Augus-PASA	exon	12199	12594	.	+	.	ID=Dca16984.1.exon5;Parent=Dca16984.1