Dca17002.1
Annotation
- 2-exons
- f-1
- sp|Q9ZQ67_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14380#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1855)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17002.1 |
75 |
205 |
205 |
28.29 |
131 |
45 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQ67_ARATH |
330 |
460 |
764 |
17.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17002.1 |
73 |
204 |
205 |
21.95 |
132 |
34 |
3e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0439900-01 |
162 |
297 |
421 |
32.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1855 |
Augustus |
mRNA |
218 |
2977 |
. |
- |
. |
ID=Dca17002.1;Parent=Dca17002 |
| scaffold1855 |
Augustus |
exon |
218 |
678 |
. |
- |
. |
ID=Dca17002.1.exon1;Parent=Dca17002.1 |
| scaffold1855 |
Augustus |
exon |
2821 |
2977 |
. |
- |
. |
ID=Dca17002.1.exon2;Parent=Dca17002.1 |
