Dca17003.1
Annotation
- 4-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1855)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17003.1 |
1 |
610 |
630 |
60.79 |
610 |
57 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
29 |
698 |
1333 |
50.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17003.1 |
223 |
610 |
630 |
26.34 |
388 |
40 |
3e-97
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
338 |
751 |
1428 |
28.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1855 |
Augustus |
mRNA |
5403 |
8156 |
. |
- |
. |
ID=Dca17003.1;Parent=Dca17003 |
| scaffold1855 |
Augustus |
exon |
5403 |
5466 |
. |
- |
. |
ID=Dca17003.1.exon1;Parent=Dca17003.1 |
| scaffold1855 |
Augustus |
exon |
6121 |
6697 |
. |
- |
. |
ID=Dca17003.1.exon2;Parent=Dca17003.1 |
| scaffold1855 |
Augustus |
exon |
6764 |
7411 |
. |
- |
. |
ID=Dca17003.1.exon3;Parent=Dca17003.1 |
| scaffold1855 |
Augustus |
exon |
7553 |
8156 |
. |
- |
. |
ID=Dca17003.1.exon4;Parent=Dca17003.1 |
