Dca17021.1
Annotation
- 3-exons
- f-1
- sp|A9PEE4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821674#unknown#0F0P0C
- sp|B9RZK6_RICCO#Protein COBRA, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0999340#unknown#0F0P0C
- Repeat List (scaffold1857)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17021.1 |
50 |
232 |
381 |
19.94 |
183 |
41 |
1e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PEE4_POPTR |
80 |
249 |
650 |
26.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17021.1 |
50 |
146 |
381 |
14.96 |
97 |
59 |
2e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G16120.1 |
89 |
185 |
661 |
14.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1857 |
Augustus |
mRNA |
4024 |
7458 |
. |
- |
. |
ID=Dca17021.1;Parent=Dca17021 |
| scaffold1857 |
Augustus |
exon |
4024 |
4727 |
. |
- |
. |
ID=Dca17021.1.exon1;Parent=Dca17021.1 |
| scaffold1857 |
Augustus |
exon |
6931 |
7217 |
. |
- |
. |
ID=Dca17021.1.exon2;Parent=Dca17021.1 |
| scaffold1857 |
Augustus |
exon |
7304 |
7458 |
. |
- |
. |
ID=Dca17021.1.exon3;Parent=Dca17021.1 |
