Carnation DB

Dca17063.1

Annotation

12-exons
f-1
sp|B9GKE1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_815074#unknown#0F0P0C
Os03t0850600-01 Similar to Integral membrane protein.
Repeat List (scaffold186)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17063.1	61	304	481	33.47	244	66	2e-86
Target_name	Start	End	Length	Cov(%)
sp\|B9GKE1_POPTR	34	276	276	88.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17063.1	68	304	481	31.6	237	63	4e-78
Target_name	Start	End	Length	Cov(%)
AT1G28140.1	41	278	280	85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold186	Augustus	mRNA	89412	95196	.	+	.	ID=Dca17063.1;Parent=Dca17063
scaffold186	Augustus	exon	89412	89687	.	+	.	ID=Dca17063.1.exon1;Parent=Dca17063.1
scaffold186	Augus-PASA	exon	90262	90637	.	+	.	ID=Dca17063.1.exon2;Parent=Dca17063.1
scaffold186	Augus-PASA	exon	90872	90942	.	+	.	ID=Dca17063.1.exon3;Parent=Dca17063.1
scaffold186	Augus-PASA	exon	91248	91346	.	+	.	ID=Dca17063.1.exon4;Parent=Dca17063.1
scaffold186	Augustus	exon	92000	92094	.	+	.	ID=Dca17063.1.exon5;Parent=Dca17063.1
scaffold186	Augustus	exon	93645	93769	.	+	.	ID=Dca17063.1.exon6;Parent=Dca17063.1
scaffold186	Augustus	exon	94184	94255	.	+	.	ID=Dca17063.1.exon7;Parent=Dca17063.1
scaffold186	Augustus	exon	94352	94402	.	+	.	ID=Dca17063.1.exon8;Parent=Dca17063.1
scaffold186	Augustus	exon	94537	94592	.	+	.	ID=Dca17063.1.exon9;Parent=Dca17063.1
scaffold186	Augustus	exon	94677	94721	.	+	.	ID=Dca17063.1.exon10;Parent=Dca17063.1
scaffold186	Augustus	exon	94865	94920	.	+	.	ID=Dca17063.1.exon11;Parent=Dca17063.1
scaffold186	Augustus	exon	95073	95196	.	+	.	ID=Dca17063.1.exon12;Parent=Dca17063.1