Dca17064.1
Annotation
- 4-exons
- f-1
- sp|B9RG45_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1439020#unknown#0F0P0C
- AT5G47870.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19384555-19385808 REVERSE LENGTH=199
- Repeat List (scaffold186)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17064.1 |
68 |
203 |
203 |
54.18 |
136 |
80 |
2e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RG45_RICCO |
82 |
220 |
220 |
63.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17064.1 |
67 |
202 |
203 |
49.75 |
136 |
70 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G47870.1 |
55 |
199 |
199 |
72.86 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold186 |
Augus-PASA |
mRNA |
96761 |
101261 |
. |
+ |
. |
ID=Dca17064.1;Parent=Dca17064 |
| scaffold186 |
Augus-PASA |
exon |
96761 |
97104 |
. |
+ |
. |
ID=Dca17064.1.exon1;Parent=Dca17064.1 |
| scaffold186 |
Augus-PASA |
exon |
97694 |
97731 |
. |
+ |
. |
ID=Dca17064.1.exon2;Parent=Dca17064.1 |
| scaffold186 |
Augus-PASA |
exon |
99251 |
99342 |
. |
+ |
. |
ID=Dca17064.1.exon3;Parent=Dca17064.1 |
| scaffold186 |
Augus-PASA |
exon |
101124 |
101261 |
. |
+ |
. |
ID=Dca17064.1.exon4;Parent=Dca17064.1 |
