Carnation DB

Dca17073.1

Annotation

6-exons
f-1
sp|F6HGX0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g02680#GO:0004816;GO:0005524;GO:0003676;GO:0006421#3F1P0C
AT5G56680.1 | Symbols: SYNC1, EMB2755, SYNC1 ARATH | Class II aminoacyl-tRNA and biotin synthetases superfamily protein | chr5:22936645-22938841 FORWARD LENGTH=572
Repeat List (scaffold186)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17073.1	12	564	564	76.41	553	78	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HGX0_VITVI	17	571	571	97.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17073.1	17	564	564	71.27	548	73	0
Target_name	Start	End	Length	Cov(%)
AT5G56680.1	21	572	572	96.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold186	Augus-PASA	mRNA	144145	147358	.	-	.	ID=Dca17073.1;Parent=Dca17073
scaffold186	Augus-PASA	exon	144145	144328	.	-	.	ID=Dca17073.1.exon1;Parent=Dca17073.1
scaffold186	Augus-PASA	exon	144443	144501	.	-	.	ID=Dca17073.1.exon2;Parent=Dca17073.1
scaffold186	Augus-PASA	exon	144763	144892	.	-	.	ID=Dca17073.1.exon3;Parent=Dca17073.1
scaffold186	Augus-PASA	exon	144971	145221	.	-	.	ID=Dca17073.1.exon4;Parent=Dca17073.1
scaffold186	Augus-PASA	exon	145483	146073	.	-	.	ID=Dca17073.1.exon5;Parent=Dca17073.1
scaffold186	Augus-PASA	exon	146879	147358	.	-	.	ID=Dca17073.1.exon6;Parent=Dca17073.1