Carnation DB

Dca171.1

Annotation

12-exons
f-1
sp|D7SK53_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g05810#GO:0005524;GO:0004672#2F0P0C
AT5G59010.1 | Symbols: | Protein kinase protein with tetratricopeptide repeat domain | chr5:23820578-23823099 REVERSE LENGTH=489
Repeat List (scaffold10)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca171.1	1482	1955	1956	19.22	474	80	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SK53_VITVI	16	489	490	96.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca171.1	1506	1953	1956	18.66	448	82	0
Target_name	Start	End	Length	Cov(%)
AT5G59010.1	37	484	489	91.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10	Augustus	mRNA	347231	360390	.	+	.	ID=Dca171.1;Parent=Dca171
scaffold10	Augustus	exon	347231	349765	.	+	.	ID=Dca171.1.exon1;Parent=Dca171.1
scaffold10	Augustus	exon	349855	350061	.	+	.	ID=Dca171.1.exon2;Parent=Dca171.1
scaffold10	Augustus	exon	353720	355425	.	+	.	ID=Dca171.1.exon3;Parent=Dca171.1
scaffold10	Augustus	exon	357106	357355	.	+	.	ID=Dca171.1.exon4;Parent=Dca171.1
scaffold10	Augustus	exon	358315	358450	.	+	.	ID=Dca171.1.exon5;Parent=Dca171.1
scaffold10	Augustus	exon	358686	358819	.	+	.	ID=Dca171.1.exon6;Parent=Dca171.1
scaffold10	Augustus	exon	358938	359043	.	+	.	ID=Dca171.1.exon7;Parent=Dca171.1
scaffold10	Augustus	exon	359161	359246	.	+	.	ID=Dca171.1.exon8;Parent=Dca171.1
scaffold10	Augustus	exon	359344	359532	.	+	.	ID=Dca171.1.exon9;Parent=Dca171.1
scaffold10	Augustus	exon	359660	359824	.	+	.	ID=Dca171.1.exon10;Parent=Dca171.1
scaffold10	Augustus	exon	359920	360033	.	+	.	ID=Dca171.1.exon11;Parent=Dca171.1
scaffold10	Augustus	exon	360148	360390	.	+	.	ID=Dca171.1.exon12;Parent=Dca171.1