Carnation DB

Dca17115.1

Annotation

5-exons
f-1
sp|B9GL42_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_751194#GO:0005524;GO:0004222;GO:0017111;GO:0006508#3F1P0C
AT4G23940.1 | Symbols: | FtsH extracellular protease family | chr4:12437108-12441841 FORWARD LENGTH=946
Repeat List (scaffold1863)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17115.1	31	454	454	50.66	424	54	4e-115
Target_name	Start	End	Length	Cov(%)
sp\|B9GL42_POPTR	18	433	932	44.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17115.1	54	454	454	49.33	401	56	2e-115
Target_name	Start	End	Length	Cov(%)
AT4G23940.1	47	444	946	42.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1863	Augustus	mRNA	173	1892	.	-	.	ID=Dca17115.1;Parent=Dca17115
scaffold1863	Augustus	exon	173	238	.	-	.	ID=Dca17115.1.exon1;Parent=Dca17115.1
scaffold1863	Augustus	exon	316	369	.	-	.	ID=Dca17115.1.exon2;Parent=Dca17115.1
scaffold1863	Augustus	exon	468	902	.	-	.	ID=Dca17115.1.exon3;Parent=Dca17115.1
scaffold1863	Augustus	exon	1001	1085	.	-	.	ID=Dca17115.1.exon4;Parent=Dca17115.1
scaffold1863	Augustus	exon	1171	1892	.	-	.	ID=Dca17115.1.exon5;Parent=Dca17115.1