Carnation DB

Dca17121.1

Annotation

5-exons
f-1
sp|B9RCR5_RICCO#Polygalacturonase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1691810#GO:0005576;GO:0047911;GO:0004650;GO:0005975;GO:0007047#2F2P1C
Repeat List (scaffold1863)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17121.1	10	442	442	69	433	70	2e-173
Target_name	Start	End	Length	Cov(%)
sp\|B9RCR5_RICCO	13	446	446	97.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17121.1	1	438	442	64.93	438	66	1e-169
Target_name	Start	End	Length	Cov(%)
AT4G23820.1	1	440	444	99.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1863	Augus-PASA	mRNA	40200	43972	.	+	.	ID=Dca17121.1;Parent=Dca17121
scaffold1863	Augus-PASA	exon	40200	40523	.	+	.	ID=Dca17121.1.exon1;Parent=Dca17121.1
scaffold1863	Augus-PASA	exon	42364	42484	.	+	.	ID=Dca17121.1.exon2;Parent=Dca17121.1
scaffold1863	Augus-PASA	exon	42815	42989	.	+	.	ID=Dca17121.1.exon3;Parent=Dca17121.1
scaffold1863	Augus-PASA	exon	43178	43248	.	+	.	ID=Dca17121.1.exon4;Parent=Dca17121.1
scaffold1863	Augus-PASA	exon	43335	43972	.	+	.	ID=Dca17121.1.exon5;Parent=Dca17121.1