Carnation DB

Dca17134.1

Annotation

6-exons
f-1
sp|B9N6I3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828301#unknown#0F0P0C
AT2G32840.1 | Symbols: | proline-rich family protein | chr2:13933101-13934836 REVERSE LENGTH=337
Repeat List (scaffold1864)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17134.1	137	269	272	27.57	133	57	1e-30
Target_name	Start	End	Length	Cov(%)
sp\|B9N6I3_POPTR	208	336	340	37.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17134.1	142	268	272	25.73	127	54	2e-31
Target_name	Start	End	Length	Cov(%)
AT2G32840.1	206	337	337	39.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1864	Augus-PASA	mRNA	52836	57862	.	+	.	ID=Dca17134.1;Parent=Dca17134
scaffold1864	Augus-PASA	exon	52836	53245	.	+	.	ID=Dca17134.1.exon1;Parent=Dca17134.1
scaffold1864	Augus-PASA	exon	53526	53571	.	+	.	ID=Dca17134.1.exon2;Parent=Dca17134.1
scaffold1864	Augus-PASA	exon	55115	55192	.	+	.	ID=Dca17134.1.exon3;Parent=Dca17134.1
scaffold1864	Augus-PASA	exon	55930	56028	.	+	.	ID=Dca17134.1.exon4;Parent=Dca17134.1
scaffold1864	Augus-PASA	exon	56841	56920	.	+	.	ID=Dca17134.1.exon5;Parent=Dca17134.1
scaffold1864	Augus-PASA	exon	57757	57862	.	+	.	ID=Dca17134.1.exon6;Parent=Dca17134.1