Dca17251.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1873)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17251.1 |
858 |
1338 |
1341 |
23.41 |
481 |
64 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
636 |
1128 |
1501 |
32.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17251.1 |
854 |
1135 |
1341 |
10.06 |
282 |
48 |
1e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
319 |
602 |
707 |
40.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1873 |
Augustus |
mRNA |
5384 |
9501 |
. |
+ |
. |
ID=Dca17251.1;Parent=Dca17251 |
| scaffold1873 |
Augustus |
exon |
5384 |
7966 |
. |
+ |
. |
ID=Dca17251.1.exon1;Parent=Dca17251.1 |
| scaffold1873 |
Augustus |
exon |
8059 |
9501 |
. |
+ |
. |
ID=Dca17251.1.exon2;Parent=Dca17251.1 |
