Carnation DB

Dca17383.1

Annotation

7-exons
f-3
sp|B9SY00_RICCO#Ubiquitin-protein ligase bre-1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1455450#GO:0016874;GO:0008270#2F0P0C
Repeat List (scaffold18833)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17383.1	1	280	280	71.78	280	72	4e-114
Target_name	Start	End	Length	Cov(%)
sp\|B9SY00_RICCO	666	945	945	29.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17383.1	2	280	280	66.42	279	67	4e-106
Target_name	Start	End	Length	Cov(%)
AT1G55250.1	622	900	900	31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold18833	Augustus	mRNA	224	3362	.	-	.	ID=Dca17383.1;Parent=Dca17383
scaffold18833	Augustus	exon	224	355	.	-	.	ID=Dca17383.1.exon1;Parent=Dca17383.1
scaffold18833	Augustus	exon	458	620	.	-	.	ID=Dca17383.1.exon2;Parent=Dca17383.1
scaffold18833	Augustus	exon	1104	1306	.	-	.	ID=Dca17383.1.exon3;Parent=Dca17383.1
scaffold18833	Augustus	exon	1414	1551	.	-	.	ID=Dca17383.1.exon4;Parent=Dca17383.1
scaffold18833	Augustus	exon	1980	2066	.	-	.	ID=Dca17383.1.exon5;Parent=Dca17383.1
scaffold18833	Augustus	exon	2199	2271	.	-	.	ID=Dca17383.1.exon6;Parent=Dca17383.1
scaffold18833	Augustus	exon	3314	3362	.	-	.	ID=Dca17383.1.exon7;Parent=Dca17383.1