Dca17400.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold1885)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17400.1 |
73 |
609 |
629 |
35.29 |
537 |
39 |
3e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
15 |
577 |
1717 |
32.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17400.1 |
534 |
602 |
629 |
3.65 |
69 |
34 |
2e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
165 |
192 |
35.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1885 |
Augustus |
mRNA |
37469 |
40078 |
. |
+ |
. |
ID=Dca17400.1;Parent=Dca17400 |
| scaffold1885 |
Augustus |
exon |
37469 |
39287 |
. |
+ |
. |
ID=Dca17400.1.exon1;Parent=Dca17400.1 |
| scaffold1885 |
Augustus |
exon |
40008 |
40078 |
. |
+ |
. |
ID=Dca17400.1.exon2;Parent=Dca17400.1 |
