Carnation DB

Dca17469.1

Annotation

5-exons
f-1
sp|B9HEJ3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_562423#unknown#0F0P0C
Repeat List (scaffold189)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17469.1	399	556	709	9.16	158	39	3e-23
Target_name	Start	End	Length	Cov(%)
sp\|B9HEJ3_POPTR	197	355	388	40.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17469.1	390	548	709	7.61	159	33	5e-17
Target_name	Start	End	Length	Cov(%)
AT5G16680.1	821	974	1311	11.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold189	Augustus	mRNA	193981	197336	.	+	.	ID=Dca17469.1;Parent=Dca17469
scaffold189	Augustus	exon	193981	194066	.	+	.	ID=Dca17469.1.exon1;Parent=Dca17469.1
scaffold189	Augustus	exon	194616	195758	.	+	.	ID=Dca17469.1.exon2;Parent=Dca17469.1
scaffold189	Augustus	exon	195869	196084	.	+	.	ID=Dca17469.1.exon3;Parent=Dca17469.1
scaffold189	Augustus	exon	196160	196308	.	+	.	ID=Dca17469.1.exon4;Parent=Dca17469.1
scaffold189	Augustus	exon	196801	197336	.	+	.	ID=Dca17469.1.exon5;Parent=Dca17469.1