Carnation DB

Dca17471.1

Annotation

12-exons
f-1
sp|D7U4G0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0044g01090#unknown#0F0P0C
AT5G64630.2 | Symbols: FAS2, NFB01, NFB1, MUB3.9 | Transducin/WD40 repeat-like superfamily protein | chr5:25833298-25836158 FORWARD LENGTH=487
Repeat List (scaffold189)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17471.1	1	448	448	73.43	448	73	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U4G0_VITVI	1	455	456	99.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17471.1	1	448	448	71.2	448	66	0
Target_name	Start	End	Length	Cov(%)
AT5G64630.2	1	487	487	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold189	Augus-PASA	mRNA	206333	211679	.	-	.	ID=Dca17471.1;Parent=Dca17471
scaffold189	Augus-PASA	exon	206333	206538	.	-	.	ID=Dca17471.1.exon1;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	206640	206740	.	-	.	ID=Dca17471.1.exon2;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	206820	206958	.	-	.	ID=Dca17471.1.exon3;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	207069	207157	.	-	.	ID=Dca17471.1.exon4;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	207240	207312	.	-	.	ID=Dca17471.1.exon5;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	207944	208040	.	-	.	ID=Dca17471.1.exon6;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	208111	208322	.	-	.	ID=Dca17471.1.exon7;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	208433	208536	.	-	.	ID=Dca17471.1.exon8;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	208851	208923	.	-	.	ID=Dca17471.1.exon9;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	209049	209075	.	-	.	ID=Dca17471.1.exon10;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	210153	210264	.	-	.	ID=Dca17471.1.exon11;Parent=Dca17471.1
scaffold189	Augus-PASA	exon	211566	211679	.	-	.	ID=Dca17471.1.exon12;Parent=Dca17471.1