Dca17479.1
Annotation
- 2-exons
- f-1
- sp|Q8S749_ORYSJ#Putative retroelement#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0081F12.19#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1890)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17479.1 |
2 |
523 |
524 |
58.77 |
522 |
57 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8S749_ORYSJ |
608 |
1151 |
1475 |
36.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17479.1 |
1 |
522 |
524 |
41.41 |
522 |
39 |
7e-103
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
613 |
1147 |
1539 |
34.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1890 |
Augustus |
mRNA |
21271 |
22987 |
. |
+ |
. |
ID=Dca17479.1;Parent=Dca17479 |
| scaffold1890 |
Augustus |
exon |
21271 |
22182 |
. |
+ |
. |
ID=Dca17479.1.exon1;Parent=Dca17479.1 |
| scaffold1890 |
Augustus |
exon |
22325 |
22987 |
. |
+ |
. |
ID=Dca17479.1.exon2;Parent=Dca17479.1 |
