Carnation DB

Dca17538.1

Annotation

5-exons
f-1
sp|E0CU01_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g01090#GO:0005783#0F0P1C
AT3G10260.3 | Symbols: | Reticulon family protein | chr3:3171413-3172568 REVERSE LENGTH=267
Repeat List (scaffold1896)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17538.1	1	251	251	65.73	251	66	3e-96
Target_name	Start	End	Length	Cov(%)
sp\|E0CU01_VITVI	1	248	248	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17538.1	1	251	251	61.75	251	62	2e-88
Target_name	Start	End	Length	Cov(%)
AT3G10260.3	21	267	267	92.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1896	Augustus	mRNA	51246	53072	.	+	.	ID=Dca17538.1;Parent=Dca17538
scaffold1896	Augustus	exon	51246	51438	.	+	.	ID=Dca17538.1.exon1;Parent=Dca17538.1
scaffold1896	Augus-PASA	exon	51587	51767	.	+	.	ID=Dca17538.1.exon2;Parent=Dca17538.1
scaffold1896	Augus-PASA	exon	51850	51991	.	+	.	ID=Dca17538.1.exon3;Parent=Dca17538.1
scaffold1896	Augus-PASA	exon	52637	52706	.	+	.	ID=Dca17538.1.exon4;Parent=Dca17538.1
scaffold1896	Augus-PASA	exon	52903	53072	.	+	.	ID=Dca17538.1.exon5;Parent=Dca17538.1