Dca17552.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1897)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17552.1 |
2 |
273 |
274 |
61.31 |
272 |
55 |
2e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
770 |
1078 |
1501 |
20.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17552.1 |
2 |
271 |
274 |
33.94 |
270 |
31 |
1e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
796 |
1073 |
1539 |
18.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1897 |
Augustus |
mRNA |
51724 |
52653 |
. |
+ |
. |
ID=Dca17552.1;Parent=Dca17552 |
| scaffold1897 |
Augustus |
exon |
51724 |
51983 |
. |
+ |
. |
ID=Dca17552.1.exon1;Parent=Dca17552.1 |
| scaffold1897 |
Augustus |
exon |
52089 |
52653 |
. |
+ |
. |
ID=Dca17552.1.exon2;Parent=Dca17552.1 |
