Dca17575.1
Annotation
- 4-exons
- f-1
- sp|B9I5H4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_774007#GO:0008270#1F0P0C
- AT3G16090.1 | Symbols: | RING/U-box superfamily protein | chr3:5456513-5458694 FORWARD LENGTH=492
- Repeat List (scaffold1899)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17575.1 |
1 |
357 |
360 |
83.05 |
357 |
84 |
1e-180
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I5H4_POPTR |
1 |
357 |
439 |
81.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17575.1 |
1 |
355 |
360 |
79.44 |
355 |
81 |
6e-173
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G16090.1 |
1 |
355 |
492 |
72.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1899 |
Augustus |
mRNA |
84580 |
86089 |
. |
- |
. |
ID=Dca17575.1;Parent=Dca17575 |
| scaffold1899 |
Augustus |
exon |
84580 |
84802 |
. |
- |
. |
ID=Dca17575.1.exon1;Parent=Dca17575.1 |
| scaffold1899 |
Augustus |
exon |
84890 |
85039 |
. |
- |
. |
ID=Dca17575.1.exon2;Parent=Dca17575.1 |
| scaffold1899 |
Augustus |
exon |
85297 |
85473 |
. |
- |
. |
ID=Dca17575.1.exon3;Parent=Dca17575.1 |
| scaffold1899 |
Augustus |
exon |
85557 |
86089 |
. |
- |
. |
ID=Dca17575.1.exon4;Parent=Dca17575.1 |
