Dca17585.1
Annotation
- 4-exons
- f-1
- sp|D7L721_ARALL#Exopolygalacturonase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478122#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- Repeat List (scaffold19)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17585.1 |
26 |
392 |
398 |
55.02 |
367 |
60 |
3e-122
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L721_ARALL |
75 |
441 |
449 |
81.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17585.1 |
26 |
392 |
398 |
53.76 |
367 |
58 |
8e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G14040.1 |
71 |
437 |
445 |
82.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19 |
Augustus |
mRNA |
11905 |
13881 |
. |
+ |
. |
ID=Dca17585.1;Parent=Dca17585 |
| scaffold19 |
Augustus |
exon |
11905 |
12027 |
. |
+ |
. |
ID=Dca17585.1.exon1;Parent=Dca17585.1 |
| scaffold19 |
Augustus |
exon |
12483 |
12803 |
. |
+ |
. |
ID=Dca17585.1.exon2;Parent=Dca17585.1 |
| scaffold19 |
Augustus |
exon |
12921 |
13436 |
. |
+ |
. |
ID=Dca17585.1.exon3;Parent=Dca17585.1 |
| scaffold19 |
Augustus |
exon |
13645 |
13881 |
. |
+ |
. |
ID=Dca17585.1.exon4;Parent=Dca17585.1 |
