Dca17588.1
Annotation
- 4-exons
- f-1
- sp|F6H559_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g01270#GO:0005576;GO:0005524;GO:0004650;GO:0004674;GO:0005529;GO:0005975;GO:0007047#4F2P1C
- AT3G14040.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:4648607-4650226 REVERSE LENGTH=445
- Repeat List (scaffold19)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17588.1 |
32 |
401 |
409 |
50.61 |
370 |
56 |
8e-123
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H559_VITVI |
24 |
391 |
1233 |
29.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17588.1 |
32 |
404 |
409 |
48.16 |
373 |
53 |
1e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G14040.1 |
67 |
437 |
445 |
83.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19 |
Augustus |
mRNA |
24044 |
25550 |
. |
+ |
. |
ID=Dca17588.1;Parent=Dca17588 |
| scaffold19 |
Augustus |
exon |
24044 |
24196 |
. |
+ |
. |
ID=Dca17588.1.exon1;Parent=Dca17588.1 |
| scaffold19 |
Augustus |
exon |
24302 |
24622 |
. |
+ |
. |
ID=Dca17588.1.exon2;Parent=Dca17588.1 |
| scaffold19 |
Augustus |
exon |
24716 |
25231 |
. |
+ |
. |
ID=Dca17588.1.exon3;Parent=Dca17588.1 |
| scaffold19 |
Augustus |
exon |
25311 |
25550 |
. |
+ |
. |
ID=Dca17588.1.exon4;Parent=Dca17588.1 |
