Carnation DB

Dca17627.1

Annotation

5-exons
f-1
sp|F6GW16_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0089g00340#unknown#0F0P0C
Repeat List (scaffold19)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17627.1	1	545	584	56.33	545	60	6e-177
Target_name	Start	End	Length	Cov(%)
sp\|F6GW16_VITVI	1	544	586	92.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17627.1	23	540	584	42.97	518	47	2e-124
Target_name	Start	End	Length	Cov(%)
Os01t0876400-03	42	584	626	86.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold19	Augustus	mRNA	345071	348094	.	+	.	ID=Dca17627.1;Parent=Dca17627
scaffold19	Augustus	exon	345071	345236	.	+	.	ID=Dca17627.1.exon1;Parent=Dca17627.1
scaffold19	Augustus	exon	345722	346983	.	+	.	ID=Dca17627.1.exon2;Parent=Dca17627.1
scaffold19	Augus-PASA	exon	347092	347177	.	+	.	ID=Dca17627.1.exon3;Parent=Dca17627.1
scaffold19	Augustus	exon	347360	347480	.	+	.	ID=Dca17627.1.exon4;Parent=Dca17627.1
scaffold19	Augustus	exon	347975	348094	.	+	.	ID=Dca17627.1.exon5;Parent=Dca17627.1