Carnation DB

Dca17667.1

Annotation

8-exons
f-1
sp|B9HMK8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_563930#unknown#0F0P0C
sp|D7LBT8_ARALL#Thylakoid lumenal 15 kDa protein, chloroplast#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_483621#unknown#0F0P0C
Repeat List (scaffold190)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17667.1	1	231	232	69.39	231	70	1e-80
Target_name	Start	End	Length	Cov(%)
sp\|B9HMK8_POPTR	1	217	218	99.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17667.1	44	231	232	65.08	188	80	1e-79
Target_name	Start	End	Length	Cov(%)
AT2G44920.2	33	223	224	85.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold190	Augus-PASA	mRNA	35040	38404	.	+	.	ID=Dca17667.1;Parent=Dca17667
scaffold190	Augus-PASA	exon	35040	35165	.	+	.	ID=Dca17667.1.exon1;Parent=Dca17667.1
scaffold190	Augus-PASA	exon	35263	35409	.	+	.	ID=Dca17667.1.exon2;Parent=Dca17667.1
scaffold190	Augus-PASA	exon	36580	36675	.	+	.	ID=Dca17667.1.exon3;Parent=Dca17667.1
scaffold190	Augus-PASA	exon	36795	36867	.	+	.	ID=Dca17667.1.exon4;Parent=Dca17667.1
scaffold190	Augus-PASA	exon	37505	37566	.	+	.	ID=Dca17667.1.exon5;Parent=Dca17667.1
scaffold190	Augus-PASA	exon	37794	37875	.	+	.	ID=Dca17667.1.exon6;Parent=Dca17667.1
scaffold190	Augus-PASA	exon	38208	38268	.	+	.	ID=Dca17667.1.exon7;Parent=Dca17667.1
scaffold190	Augus-PASA	exon	38353	38404	.	+	.	ID=Dca17667.1.exon8;Parent=Dca17667.1