Carnation DB

Dca17680.1

Annotation

17-exons
f-1
sp|B9N5N8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828145#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
AT2G47500.1 | Symbols: | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr2:19493247-19497882 FORWARD LENGTH=983
Repeat List (scaffold190)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17680.1	1	1056	1056	63.16	1056	59	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N5N8_POPTR	1	1129	1129	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17680.1	64	1054	1056	55.2	991	53	0
Target_name	Start	End	Length	Cov(%)
AT3G44730.1	1	1086	1087	99.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold190	Augustus	mRNA	148131	156779	.	+	.	ID=Dca17680.1;Parent=Dca17680
scaffold190	Augustus	exon	148131	148281	.	+	.	ID=Dca17680.1.exon1;Parent=Dca17680.1
scaffold190	Augustus	exon	151685	151848	.	+	.	ID=Dca17680.1.exon2;Parent=Dca17680.1
scaffold190	Augustus	exon	152149	152292	.	+	.	ID=Dca17680.1.exon3;Parent=Dca17680.1
scaffold190	Augustus	exon	152404	152784	.	+	.	ID=Dca17680.1.exon4;Parent=Dca17680.1
scaffold190	Augustus	exon	152939	153007	.	+	.	ID=Dca17680.1.exon5;Parent=Dca17680.1
scaffold190	Augustus	exon	153161	153385	.	+	.	ID=Dca17680.1.exon6;Parent=Dca17680.1
scaffold190	Augustus	exon	153512	153593	.	+	.	ID=Dca17680.1.exon7;Parent=Dca17680.1
scaffold190	Augustus	exon	153682	153777	.	+	.	ID=Dca17680.1.exon8;Parent=Dca17680.1
scaffold190	Augustus	exon	153885	154064	.	+	.	ID=Dca17680.1.exon9;Parent=Dca17680.1
scaffold190	Augustus	exon	154150	154256	.	+	.	ID=Dca17680.1.exon10;Parent=Dca17680.1
scaffold190	Augustus	exon	154512	154677	.	+	.	ID=Dca17680.1.exon11;Parent=Dca17680.1
scaffold190	Augustus	exon	154849	154954	.	+	.	ID=Dca17680.1.exon12;Parent=Dca17680.1
scaffold190	Augustus	exon	155035	155288	.	+	.	ID=Dca17680.1.exon13;Parent=Dca17680.1
scaffold190	Augustus	exon	155465	155628	.	+	.	ID=Dca17680.1.exon14;Parent=Dca17680.1
scaffold190	Augustus	exon	155725	155886	.	+	.	ID=Dca17680.1.exon15;Parent=Dca17680.1
scaffold190	Augustus	exon	155958	156526	.	+	.	ID=Dca17680.1.exon16;Parent=Dca17680.1
scaffold190	Augustus	exon	156629	156779	.	+	.	ID=Dca17680.1.exon17;Parent=Dca17680.1