Carnation DB

Dca17688.1

Annotation

6-exons
f-1
sp|B9SM61_RICCO#Ubiquitin-conjugating enzyme E2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0878930#GO:0004842#1F0P0C
Repeat List (scaffold1900)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17688.1	118	272	272	40.8	155	72	4e-65
Target_name	Start	End	Length	Cov(%)
sp\|B9SM61_RICCO	27	181	181	85.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17688.1	109	272	272	38.6	164	65	4e-63
Target_name	Start	End	Length	Cov(%)
AT3G13550.1	19	182	182	90.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1900	Augustus	mRNA	25966	29727	.	+	.	ID=Dca17688.1;Parent=Dca17688
scaffold1900	Augustus	exon	25966	26227	.	+	.	ID=Dca17688.1.exon1;Parent=Dca17688.1
scaffold1900	Augustus	exon	27945	27961	.	+	.	ID=Dca17688.1.exon2;Parent=Dca17688.1
scaffold1900	Augus-PASA	exon	28688	28907	.	+	.	ID=Dca17688.1.exon3;Parent=Dca17688.1
scaffold1900	Augus-PASA	exon	29237	29310	.	+	.	ID=Dca17688.1.exon4;Parent=Dca17688.1
scaffold1900	Augus-PASA	exon	29386	29533	.	+	.	ID=Dca17688.1.exon5;Parent=Dca17688.1
scaffold1900	Augus-PASA	exon	29630	29727	.	+	.	ID=Dca17688.1.exon6;Parent=Dca17688.1