Dca17825.1
Annotation
- 2-exons
- f-1
- sp|Q53KC9_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g22340#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold191)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17825.1 |
1 |
150 |
189 |
32.27 |
150 |
39 |
4e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53KC9_ORYSJ |
907 |
1063 |
1497 |
10.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17825.1 |
54 |
143 |
189 |
17.98 |
90 |
38 |
6e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G01410.1 |
189 |
278 |
294 |
30.61 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold191 |
Augustus |
mRNA |
219872 |
221323 |
. |
+ |
. |
ID=Dca17825.1;Parent=Dca17825 |
| scaffold191 |
Augustus |
exon |
219872 |
220044 |
. |
+ |
. |
ID=Dca17825.1.exon1;Parent=Dca17825.1 |
| scaffold191 |
Augustus |
exon |
220927 |
221323 |
. |
+ |
. |
ID=Dca17825.1.exon2;Parent=Dca17825.1 |
