Dca17842.1
Annotation
- 4-exons
- f-1
- sp|F6HLW5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g04470#GO:0016021;GO:0005524;GO:0042626#2F0P1C
- sp|D7KEU0_ARALL#ATMRP13#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_313679#GO:0016021;GO:0005524;GO:0042626#2F0P1C
- Repeat List (scaffold19118)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17842.1 |
1 |
340 |
348 |
76.43 |
340 |
79 |
6e-147
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HLW5_VITVI |
1151 |
1490 |
1624 |
20.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17842.1 |
1 |
344 |
348 |
72.41 |
344 |
74 |
3e-142
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G30420.1 |
1147 |
1490 |
1495 |
23.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19118 |
Augustus |
mRNA |
68 |
2216 |
. |
+ |
. |
ID=Dca17842.1;Parent=Dca17842 |
| scaffold19118 |
Augustus |
exon |
68 |
599 |
. |
+ |
. |
ID=Dca17842.1.exon1;Parent=Dca17842.1 |
| scaffold19118 |
Augustus |
exon |
1089 |
1210 |
. |
+ |
. |
ID=Dca17842.1.exon2;Parent=Dca17842.1 |
| scaffold19118 |
Augustus |
exon |
1550 |
1795 |
. |
+ |
. |
ID=Dca17842.1.exon3;Parent=Dca17842.1 |
| scaffold19118 |
Augustus |
exon |
2070 |
2216 |
. |
+ |
. |
ID=Dca17842.1.exon4;Parent=Dca17842.1 |
