Dca17845.1
Annotation
- 2-exons
- f-1
- sp|B9RF66_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1431650#GO:0016998#0F1P0C
- AT1G55000.1 | Symbols: | peptidoglycan-binding LysM domain-containing protein | chr1:20514762-20516166 FORWARD LENGTH=221
- Repeat List (scaffold1912)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17845.1 |
1 |
261 |
261 |
65.51 |
261 |
66 |
2e-102
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RF66_RICCO |
1 |
260 |
260 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17845.1 |
44 |
260 |
261 |
56.32 |
217 |
68 |
3e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G55000.1 |
2 |
220 |
221 |
99.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1912 |
Augus-PASA |
mRNA |
39540 |
42525 |
. |
- |
. |
ID=Dca17845.1;Parent=Dca17845 |
| scaffold1912 |
Augus-PASA |
exon |
39540 |
39917 |
. |
- |
. |
ID=Dca17845.1.exon1;Parent=Dca17845.1 |
| scaffold1912 |
Augus-PASA |
exon |
42118 |
42525 |
. |
- |
. |
ID=Dca17845.1.exon2;Parent=Dca17845.1 |
