Dca17869.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1914)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17869.1 |
369 |
561 |
573 |
13.78 |
193 |
41 |
1e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
23 |
215 |
1501 |
12.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17869.1 |
382 |
557 |
573 |
9.07 |
176 |
30 |
7e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
255 |
296 |
59.45 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1914 |
Augustus |
mRNA |
21104 |
25474 |
. |
+ |
. |
ID=Dca17869.1;Parent=Dca17869 |
| scaffold1914 |
Augustus |
exon |
21104 |
22103 |
. |
+ |
. |
ID=Dca17869.1.exon1;Parent=Dca17869.1 |
| scaffold1914 |
Augustus |
exon |
24753 |
25474 |
. |
+ |
. |
ID=Dca17869.1.exon2;Parent=Dca17869.1 |
