Dca17907.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold19162)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17907.1 |
1 |
102 |
102 |
69.6 |
102 |
52 |
5e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
682 |
820 |
896 |
15.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17907.1 |
26 |
92 |
102 |
26.47 |
67 |
41 |
9e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
447 |
513 |
1262 |
5.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19162 |
Augustus |
mRNA |
6147 |
6566 |
. |
- |
. |
ID=Dca17907.1;Parent=Dca17907 |
| scaffold19162 |
Augustus |
exon |
6147 |
6379 |
. |
- |
. |
ID=Dca17907.1.exon1;Parent=Dca17907.1 |
| scaffold19162 |
Augustus |
exon |
6491 |
6566 |
. |
- |
. |
ID=Dca17907.1.exon2;Parent=Dca17907.1 |
