Carnation DB

Dca17971.1

Annotation

7-exons
f-1
sp|B9H4M6_POPTR#Amino acid permease#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=PtrAAP2#GO:0016021#0F0P1C
Repeat List (scaffold192)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17971.1	19	479	479	75.15	461	79	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H4M6_POPTR	3	463	463	99.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17971.1	6	479	479	75.57	474	74	0
Target_name	Start	End	Length	Cov(%)
AT5G09220.1	1	493	493	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold192	Augus-PASA	mRNA	217852	222118	.	+	.	ID=Dca17971.1;Parent=Dca17971
scaffold192	Augus-PASA	exon	217852	217857	.	+	.	ID=Dca17971.1.exon1;Parent=Dca17971.1
scaffold192	Augus-PASA	exon	219881	219977	.	+	.	ID=Dca17971.1.exon2;Parent=Dca17971.1
scaffold192	Augus-PASA	exon	220359	220592	.	+	.	ID=Dca17971.1.exon3;Parent=Dca17971.1
scaffold192	Augus-PASA	exon	220674	220767	.	+	.	ID=Dca17971.1.exon4;Parent=Dca17971.1
scaffold192	Augus-PASA	exon	220855	221069	.	+	.	ID=Dca17971.1.exon5;Parent=Dca17971.1
scaffold192	Augus-PASA	exon	221235	221374	.	+	.	ID=Dca17971.1.exon6;Parent=Dca17971.1
scaffold192	Augus-PASA	exon	221465	222118	.	+	.	ID=Dca17971.1.exon7;Parent=Dca17971.1