Carnation DB

Dca17980.1

Annotation

5-exons
f-1
sp|A5B029_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021002#unknown#0F0P0C
Repeat List (scaffold1920)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17980.1	558	987	993	13.39	430	30	4e-44
Target_name	Start	End	Length	Cov(%)
sp\|A5B029_VITVI	4	429	495	86.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17980.1	833	993	993	5.13	161	30	2e-07
Target_name	Start	End	Length	Cov(%)
Os03t0439900-01	63	222	421	38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1920	Augustus	mRNA	40291	44783	.	-	.	ID=Dca17980.1;Parent=Dca17980
scaffold1920	Augustus	exon	40291	41706	.	-	.	ID=Dca17980.1.exon1;Parent=Dca17980.1
scaffold1920	Augustus	exon	41760	42544	.	-	.	ID=Dca17980.1.exon2;Parent=Dca17980.1
scaffold1920	Augustus	exon	42624	42838	.	-	.	ID=Dca17980.1.exon3;Parent=Dca17980.1
scaffold1920	Augustus	exon	43246	43766	.	-	.	ID=Dca17980.1.exon4;Parent=Dca17980.1
scaffold1920	Augustus	exon	44739	44783	.	-	.	ID=Dca17980.1.exon5;Parent=Dca17980.1