Dca18002.1
Annotation
- 4-exons
- f-1
- sp|B9H8C0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_559591#GO:0005524;GO:0004075#2F0P0C
- AT1G03090.2 | Symbols: MCCA | methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) | chr1:739715-743819 FORWARD LENGTH=734
- Repeat List (scaffold1921)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18002.1 |
5 |
105 |
122 |
67.21 |
101 |
82 |
1e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H8C0_POPTR |
204 |
304 |
760 |
13.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18002.1 |
5 |
105 |
122 |
68.85 |
101 |
84 |
3e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G03090.2 |
202 |
302 |
734 |
13.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1921 |
Augustus |
mRNA |
97805 |
98738 |
. |
+ |
. |
ID=Dca18002.1;Parent=Dca18002 |
| scaffold1921 |
Augustus |
exon |
97805 |
97957 |
. |
+ |
. |
ID=Dca18002.1.exon1;Parent=Dca18002.1 |
| scaffold1921 |
Augustus |
exon |
98065 |
98160 |
. |
+ |
. |
ID=Dca18002.1.exon2;Parent=Dca18002.1 |
| scaffold1921 |
Augustus |
exon |
98243 |
98302 |
. |
+ |
. |
ID=Dca18002.1.exon3;Parent=Dca18002.1 |
| scaffold1921 |
Augustus |
exon |
98679 |
98738 |
. |
+ |
. |
ID=Dca18002.1.exon4;Parent=Dca18002.1 |
