Dca18012.1
Annotation
- 4-exons
- f-1
- sp|B9MZU7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_595593#GO:0016020#0F0P1C
- AT5G27490.1 | Symbols: | Integral membrane Yip1 family protein | chr5:9703130-9704653 REVERSE LENGTH=282
- Repeat List (scaffold1922)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18012.1 |
3 |
222 |
222 |
81.08 |
220 |
82 |
6e-106
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MZU7_POPTR |
65 |
284 |
284 |
77.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18012.1 |
3 |
222 |
222 |
80.18 |
220 |
81 |
5e-105
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G27490.1 |
62 |
282 |
282 |
78.36 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1922 |
Augustus |
mRNA |
34716 |
36664 |
. |
+ |
. |
ID=Dca18012.1;Parent=Dca18012 |
| scaffold1922 |
Augustus |
exon |
34716 |
34722 |
. |
+ |
. |
ID=Dca18012.1.exon1;Parent=Dca18012.1 |
| scaffold1922 |
Augustus |
exon |
34922 |
35108 |
. |
+ |
. |
ID=Dca18012.1.exon2;Parent=Dca18012.1 |
| scaffold1922 |
Augustus |
exon |
35680 |
35947 |
. |
+ |
. |
ID=Dca18012.1.exon3;Parent=Dca18012.1 |
| scaffold1922 |
Augustus |
exon |
36458 |
36664 |
. |
+ |
. |
ID=Dca18012.1.exon4;Parent=Dca18012.1 |
