Carnation DB

Dca18172.1

Annotation

11-exons
f-1
sp|D7TPA0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0104g00630#GO:0016881;GO:0008270#2F0P0C
sp|D7KSY2_ARALL#Zinc finger family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_474968#GO:0016881;GO:0008270#2F0P0C
Repeat List (scaffold1933)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18172.1	1	330	332	76.2	330	76	1e-149
Target_name	Start	End	Length	Cov(%)
sp\|D7TPA0_VITVI	1	334	343	97.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18172.1	1	317	332	67.16	317	69	1e-129
Target_name	Start	End	Length	Cov(%)
AT1G63900.2	1	325	347	93.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1933	Augustus	mRNA	14013	19375	.	-	.	ID=Dca18172.1;Parent=Dca18172
scaffold1933	Augustus	exon	14013	14094	.	-	.	ID=Dca18172.1.exon1;Parent=Dca18172.1
scaffold1933	Augustus	exon	15260	15356	.	-	.	ID=Dca18172.1.exon2;Parent=Dca18172.1
scaffold1933	Augus-PASA	exon	15443	15486	.	-	.	ID=Dca18172.1.exon3;Parent=Dca18172.1
scaffold1933	Augus-PASA	exon	15973	16083	.	-	.	ID=Dca18172.1.exon4;Parent=Dca18172.1
scaffold1933	Augus-PASA	exon	16173	16285	.	-	.	ID=Dca18172.1.exon5;Parent=Dca18172.1
scaffold1933	Augus-PASA	exon	16943	17008	.	-	.	ID=Dca18172.1.exon6;Parent=Dca18172.1
scaffold1933	Augus-PASA	exon	17089	17226	.	-	.	ID=Dca18172.1.exon7;Parent=Dca18172.1
scaffold1933	Augus-PASA	exon	17337	17432	.	-	.	ID=Dca18172.1.exon8;Parent=Dca18172.1
scaffold1933	Augus-PASA	exon	17598	17722	.	-	.	ID=Dca18172.1.exon9;Parent=Dca18172.1
scaffold1933	Augus-PASA	exon	19121	19173	.	-	.	ID=Dca18172.1.exon10;Parent=Dca18172.1
scaffold1933	Augus-PASA	exon	19302	19375	.	-	.	ID=Dca18172.1.exon11;Parent=Dca18172.1