Carnation DB

Dca18173.1

Annotation

18-exons
f-1
sp|D7TX68_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0084g00520#unknown#0F0P0C
AT5G09860.1 | Symbols: AtTHO1, THO1, AtHPR1, HPR1 | nuclear matrix protein-related | chr5:3066815-3070733 FORWARD LENGTH=599
Repeat List (scaffold1933)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18173.1	1	557	557	77.37	557	72	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TX68_VITVI	14	609	613	97.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18173.1	1	552	557	70.73	552	66	0
Target_name	Start	End	Length	Cov(%)
AT5G09860.1	2	592	599	98.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1933	Augustus	mRNA	22754	35802	.	-	.	ID=Dca18173.1;Parent=Dca18173
scaffold1933	Augustus	exon	22754	23005	.	-	.	ID=Dca18173.1.exon1;Parent=Dca18173.1
scaffold1933	Augustus	exon	24166	24312	.	-	.	ID=Dca18173.1.exon2;Parent=Dca18173.1
scaffold1933	Augustus	exon	24681	24731	.	-	.	ID=Dca18173.1.exon3;Parent=Dca18173.1
scaffold1933	Augustus	exon	24884	24955	.	-	.	ID=Dca18173.1.exon4;Parent=Dca18173.1
scaffold1933	Augustus	exon	25049	25115	.	-	.	ID=Dca18173.1.exon5;Parent=Dca18173.1
scaffold1933	Augustus	exon	25928	26004	.	-	.	ID=Dca18173.1.exon6;Parent=Dca18173.1
scaffold1933	Augustus	exon	26090	26206	.	-	.	ID=Dca18173.1.exon7;Parent=Dca18173.1
scaffold1933	Augustus	exon	26965	27006	.	-	.	ID=Dca18173.1.exon8;Parent=Dca18173.1
scaffold1933	Augustus	exon	27403	27468	.	-	.	ID=Dca18173.1.exon9;Parent=Dca18173.1
scaffold1933	Augustus	exon	27553	27678	.	-	.	ID=Dca18173.1.exon10;Parent=Dca18173.1
scaffold1933	Augustus	exon	30402	30448	.	-	.	ID=Dca18173.1.exon11;Parent=Dca18173.1
scaffold1933	Augustus	exon	30532	30597	.	-	.	ID=Dca18173.1.exon12;Parent=Dca18173.1
scaffold1933	Augustus	exon	30672	30744	.	-	.	ID=Dca18173.1.exon13;Parent=Dca18173.1
scaffold1933	Augustus	exon	32321	32392	.	-	.	ID=Dca18173.1.exon14;Parent=Dca18173.1
scaffold1933	Augustus	exon	32489	32634	.	-	.	ID=Dca18173.1.exon15;Parent=Dca18173.1
scaffold1933	Augustus	exon	33075	33168	.	-	.	ID=Dca18173.1.exon16;Parent=Dca18173.1
scaffold1933	Augustus	exon	35282	35356	.	-	.	ID=Dca18173.1.exon17;Parent=Dca18173.1
scaffold1933	Augustus	exon	35719	35802	.	-	.	ID=Dca18173.1.exon18;Parent=Dca18173.1