Carnation DB

Dca18204.1

Annotation

8-exons
f-1
sp|G5DWC2_SILLA#AP-1 complex subunit gamma-1#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0030131;GO:0044431;GO:0005488;GO:0008565;GO:0006886;GO:0016192#2F2P2C
Repeat List (scaffold1936)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18204.1	1	163	374	33.68	163	78	3e-64
Target_name	Start	End	Length	Cov(%)
sp\|G5DWC2_SILLA	53	193	878	16.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18204.1	1	163	374	32.62	163	75	4e-64
Target_name	Start	End	Length	Cov(%)
AT1G60070.2	53	193	898	15.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1936	Augustus	mRNA	17977	25064	.	+	.	ID=Dca18204.1;Parent=Dca18204
scaffold1936	Augustus	exon	17977	18177	.	+	.	ID=Dca18204.1.exon1;Parent=Dca18204.1
scaffold1936	Augustus	exon	18273	18392	.	+	.	ID=Dca18204.1.exon2;Parent=Dca18204.1
scaffold1936	Augustus	exon	18839	18910	.	+	.	ID=Dca18204.1.exon3;Parent=Dca18204.1
scaffold1936	Augustus	exon	19299	19404	.	+	.	ID=Dca18204.1.exon4;Parent=Dca18204.1
scaffold1936	Augustus	exon	19587	19634	.	+	.	ID=Dca18204.1.exon5;Parent=Dca18204.1
scaffold1936	Augustus	exon	21906	22046	.	+	.	ID=Dca18204.1.exon6;Parent=Dca18204.1
scaffold1936	Augus-PASA	exon	24099	24226	.	+	.	ID=Dca18204.1.exon7;Parent=Dca18204.1
scaffold1936	Augustus	exon	24756	25064	.	+	.	ID=Dca18204.1.exon8;Parent=Dca18204.1