Carnation DB

Dca18216.1

Annotation

5-exons
f-1
sp|C6SYF0_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0008270#1F0P0C
Os03t0839000-01 Zinc finger, RING/FYVE/PHD-type domain containing protein.
Repeat List (scaffold1937)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18216.1	3	186	190	61.05	184	64	4e-68
Target_name	Start	End	Length	Cov(%)
sp\|C6SYF0_SOYBN	2	185	186	98.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18216.1	4	186	190	64.73	183	68	7e-65
Target_name	Start	End	Length	Cov(%)
AT1G72175.1	2	184	185	98.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1937	Augustus	mRNA	42178	44925	.	+	.	ID=Dca18216.1;Parent=Dca18216
scaffold1937	Augustus	exon	42178	42274	.	+	.	ID=Dca18216.1.exon1;Parent=Dca18216.1
scaffold1937	Augustus	exon	44162	44361	.	+	.	ID=Dca18216.1.exon2;Parent=Dca18216.1
scaffold1937	Augustus	exon	44451	44552	.	+	.	ID=Dca18216.1.exon3;Parent=Dca18216.1
scaffold1937	Augustus	exon	44654	44705	.	+	.	ID=Dca18216.1.exon4;Parent=Dca18216.1
scaffold1937	Augustus	exon	44804	44925	.	+	.	ID=Dca18216.1.exon5;Parent=Dca18216.1