Carnation DB

Dca18252.1

Annotation

10-exons
f-1
sp|F6H341_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g06720#GO:0008287;GO:0046872;GO:0004722;GO:0006470#2F1P1C
sp|B9RNU7_RICCO#Protein phosphatase 2c, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0920800#GO:0008287;GO:0046872;GO:0004722;GO:0006470#2F1P1C
Repeat List (scaffold194)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18252.1	1	364	367	81.47	364	82	2e-180
Target_name	Start	End	Length	Cov(%)
sp\|F6H341_VITVI	37	393	393	90.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18252.1	1	350	367	74.38	350	77	7e-168
Target_name	Start	End	Length	Cov(%)
AT4G31860.1	1	356	357	99.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold194	Augustus	mRNA	150894	157306	.	+	.	ID=Dca18252.1;Parent=Dca18252
scaffold194	Augustus	exon	150894	151010	.	+	.	ID=Dca18252.1.exon1;Parent=Dca18252.1
scaffold194	Augus-PASA	exon	152487	152550	.	+	.	ID=Dca18252.1.exon2;Parent=Dca18252.1
scaffold194	Augus-PASA	exon	153434	153542	.	+	.	ID=Dca18252.1.exon3;Parent=Dca18252.1
scaffold194	Augus-PASA	exon	154289	154439	.	+	.	ID=Dca18252.1.exon4;Parent=Dca18252.1
scaffold194	Augus-PASA	exon	154983	155108	.	+	.	ID=Dca18252.1.exon5;Parent=Dca18252.1
scaffold194	Augus-PASA	exon	155239	155362	.	+	.	ID=Dca18252.1.exon6;Parent=Dca18252.1
scaffold194	Augus-PASA	exon	155982	156058	.	+	.	ID=Dca18252.1.exon7;Parent=Dca18252.1
scaffold194	Augus-PASA	exon	156439	156491	.	+	.	ID=Dca18252.1.exon8;Parent=Dca18252.1
scaffold194	Augus-PASA	exon	156769	156823	.	+	.	ID=Dca18252.1.exon9;Parent=Dca18252.1
scaffold194	Augus-PASA	exon	157079	157306	.	+	.	ID=Dca18252.1.exon10;Parent=Dca18252.1