Dca18280.1
Annotation
- 4-exons
- f-1
- sp|Q6L4J8_SOLDE#Putative polyprotein#Solanum demissum (Wild potato)#Name=PGEC219.6#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1941)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18280.1 |
142 |
297 |
299 |
27.09 |
156 |
51 |
4e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L4J8_SOLDE |
418 |
573 |
1065 |
14.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18280.1 |
217 |
299 |
299 |
12.04 |
83 |
44 |
9e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
651 |
731 |
1428 |
5.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1941 |
Augustus |
mRNA |
51519 |
53337 |
. |
- |
. |
ID=Dca18280.1;Parent=Dca18280 |
| scaffold1941 |
Augustus |
exon |
51519 |
51771 |
. |
- |
. |
ID=Dca18280.1.exon1;Parent=Dca18280.1 |
| scaffold1941 |
Augustus |
exon |
52133 |
52332 |
. |
- |
. |
ID=Dca18280.1.exon2;Parent=Dca18280.1 |
| scaffold1941 |
Augustus |
exon |
52781 |
53083 |
. |
- |
. |
ID=Dca18280.1.exon3;Parent=Dca18280.1 |
| scaffold1941 |
Augustus |
exon |
53194 |
53337 |
. |
- |
. |
ID=Dca18280.1.exon4;Parent=Dca18280.1 |
