Carnation DB

Dca183.1

Annotation

5-exons
f-1
sp|B9HP82_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_833248#GO:0003676;GO:0000166#2F0P0C
AT1G07350.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:2257732-2260101 REVERSE LENGTH=382
Repeat List (scaffold10)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca183.1	1	275	359	46.51	275	57	1e-56
Target_name	Start	End	Length	Cov(%)
sp\|B9HP82_POPTR	1	271	316	85.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca183.1	1	193	359	35.65	193	63	2e-39
Target_name	Start	End	Length	Cov(%)
AT1G07350.1	31	234	382	53.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10	Augustus	mRNA	418575	420401	.	+	.	ID=Dca183.1;Parent=Dca183
scaffold10	Augustus	exon	418575	418672	.	+	.	ID=Dca183.1.exon1;Parent=Dca183.1
scaffold10	Augustus	exon	418777	418885	.	+	.	ID=Dca183.1.exon2;Parent=Dca183.1
scaffold10	Augustus	exon	418980	419129	.	+	.	ID=Dca183.1.exon3;Parent=Dca183.1
scaffold10	Augustus	exon	419591	419654	.	+	.	ID=Dca183.1.exon4;Parent=Dca183.1
scaffold10	Augustus	exon	419743	420401	.	+	.	ID=Dca183.1.exon5;Parent=Dca183.1