Carnation DB

Dca18340.1

Annotation

5-exons
f-1
sp|D7TH79_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g02210#GO:0008270#1F0P0C
sp|B9SI15_RICCO#Ubiquitin-protein ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0612080#GO:0016874;GO:0008270#2F0P0C
Repeat List (scaffold1945)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18340.1	1	228	243	64.6	228	69	6e-93
Target_name	Start	End	Length	Cov(%)
sp\|D7TH79_VITVI	1	228	242	94.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18340.1	1	226	243	59.25	226	64	5e-87
Target_name	Start	End	Length	Cov(%)
Os07t0661600-01	1	226	243	93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1945	Augustus	mRNA	31285	34236	.	-	.	ID=Dca18340.1;Parent=Dca18340
scaffold1945	Augustus	exon	31285	31498	.	-	.	ID=Dca18340.1.exon1;Parent=Dca18340.1
scaffold1945	Augustus	exon	31751	31985	.	-	.	ID=Dca18340.1.exon2;Parent=Dca18340.1
scaffold1945	Augustus	exon	32074	32140	.	-	.	ID=Dca18340.1.exon3;Parent=Dca18340.1
scaffold1945	Augustus	exon	32231	32381	.	-	.	ID=Dca18340.1.exon4;Parent=Dca18340.1
scaffold1945	Augustus	exon	34172	34236	.	-	.	ID=Dca18340.1.exon5;Parent=Dca18340.1