Carnation DB

Dca18343.1

Annotation

5-exons
f-1
sp|F6HC03_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g00270#GO:0005840;GO:0003735;GO:0042254;GO:0006414#1F2P1C
AT2G40010.1 | Symbols: | Ribosomal protein L10 family protein | chr2:16708578-16710448 REVERSE LENGTH=317
Repeat List (scaffold1945)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18343.1	15	293	332	62.95	279	75	8e-121
Target_name	Start	End	Length	Cov(%)
sp\|F6HC03_VITVI	6	284	320	87.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18343.1	15	300	332	61.74	286	72	8e-120
Target_name	Start	End	Length	Cov(%)
AT2G40010.1	6	292	317	90.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1945	Augustus	mRNA	46900	49161	.	+	.	ID=Dca18343.1;Parent=Dca18343
scaffold1945	Augustus	exon	46900	47184	.	+	.	ID=Dca18343.1.exon1;Parent=Dca18343.1
scaffold1945	Augustus	exon	47961	48029	.	+	.	ID=Dca18343.1.exon2;Parent=Dca18343.1
scaffold1945	Augustus	exon	48272	48370	.	+	.	ID=Dca18343.1.exon3;Parent=Dca18343.1
scaffold1945	Augustus	exon	48474	48866	.	+	.	ID=Dca18343.1.exon4;Parent=Dca18343.1
scaffold1945	Augustus	exon	49009	49161	.	+	.	ID=Dca18343.1.exon5;Parent=Dca18343.1