Dca18368.1
Annotation
- 3-exons
- f-1
- sp|A9PDI1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_836929#GO:0030131;GO:0030132;GO:0006886;GO:0016192#0F2P2C
- AT5G46630.2 | Symbols: | Clathrin adaptor complexes medium subunit family protein | chr5:18920580-18923060 FORWARD LENGTH=441
- Repeat List (scaffold19479)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18368.1 |
1 |
82 |
189 |
34.39 |
82 |
78 |
5e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PDI1_POPTR |
120 |
203 |
438 |
19.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18368.1 |
1 |
82 |
189 |
33.86 |
82 |
77 |
3e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G46630.2 |
120 |
203 |
441 |
19.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19479 |
Augustus |
mRNA |
1463 |
2836 |
. |
- |
. |
ID=Dca18368.1;Parent=Dca18368 |
| scaffold19479 |
Augustus |
exon |
1463 |
1852 |
. |
- |
. |
ID=Dca18368.1.exon1;Parent=Dca18368.1 |
| scaffold19479 |
Augustus |
exon |
2535 |
2624 |
. |
- |
. |
ID=Dca18368.1.exon2;Parent=Dca18368.1 |
| scaffold19479 |
Augustus |
exon |
2747 |
2836 |
. |
- |
. |
ID=Dca18368.1.exon3;Parent=Dca18368.1 |
