Dca18387.1
Annotation
- 3-exons
- f-1
- sp|Q9ZUK1_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15100#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold195)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18387.1 |
120 |
286 |
289 |
35.64 |
167 |
48 |
2e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZUK1_ARATH |
348 |
562 |
1329 |
16.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18387.1 |
201 |
289 |
289 |
13.14 |
89 |
43 |
6e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
293 |
381 |
707 |
12.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold195 |
Augustus |
mRNA |
848 |
2468 |
. |
- |
. |
ID=Dca18387.1;Parent=Dca18387 |
| scaffold195 |
Augustus |
exon |
848 |
1165 |
. |
- |
. |
ID=Dca18387.1.exon1;Parent=Dca18387.1 |
| scaffold195 |
Augustus |
exon |
1802 |
2188 |
. |
- |
. |
ID=Dca18387.1.exon2;Parent=Dca18387.1 |
| scaffold195 |
Augustus |
exon |
2304 |
2468 |
. |
- |
. |
ID=Dca18387.1.exon3;Parent=Dca18387.1 |
