Dca18422.1
Annotation
- 3-exons
- f-1
- sp|A5BB53_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_015163#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1950)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18422.1 |
1 |
654 |
662 |
48.94 |
654 |
47 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BB53_VITVI |
1186 |
1863 |
2177 |
31.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18422.1 |
6 |
151 |
662 |
8.61 |
146 |
38 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
234 |
378 |
707 |
20.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1950 |
Augustus |
mRNA |
14085 |
16585 |
. |
+ |
. |
ID=Dca18422.1;Parent=Dca18422 |
| scaffold1950 |
Augustus |
exon |
14085 |
14538 |
. |
+ |
. |
ID=Dca18422.1.exon1;Parent=Dca18422.1 |
| scaffold1950 |
Augustus |
exon |
14945 |
16452 |
. |
+ |
. |
ID=Dca18422.1.exon2;Parent=Dca18422.1 |
| scaffold1950 |
Augustus |
exon |
16559 |
16585 |
. |
+ |
. |
ID=Dca18422.1.exon3;Parent=Dca18422.1 |
